ABOUT THIS RECORDspecies: Elaeis guineensis
miRNA family: MIR528
source: microPC, original name: miR528
Taxonomy by NCBI:
Elaeis guineensis Elaeis Elaeidinae Cocoseae Arecoideae Arecaceae Arecales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TGGAAGGGGCATGCAGAGGAG miRNA* CCTGTGCTTGCCTCCTCCA mismatches: 4 bulges: 0 |
pre-miRNA
TGGAAGGGGCATGCAGAGGAGAGGTCAAGATGGANNGAAAGAAAGCGATATTTTTCATCTCAGTGCTTCTTCTGGTGGCAAATTCCTGTGCTTGCCTCCT
CCA
dot-bracket secondary structure
.(((.((((((.(((.(((((..((((.((((((......(....).......)))))).(((........))).))))...))))).))).)))))).)
)).
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
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TGGAAGGGGCATGCAGAGGAGAGGTCAAGATGGANNGAAAGAAAGCGATATTTTTCATCTCAGTGCTTCTTCTGGTGGCAAATTCCTGTGCTTGCCTCCT
CCA
dot-bracket secondary structure
.(((.((((((.(((.(((((..((((.((((((......(....).......)))))).(((........))).))))...))))).))).)))))).)
)).
SIMILARITIES| miRBase zma-MIR528b: 0.00008 PMRD osa-miR528: 0.00008 microPC miR528: 0.00008 | UniProt no hits RFAM no hits |
MOREmiRNEST target predictions
non-miRNEST targets: none
download this record
