miRNEST 2.0, an integrative microRNA resource

miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Agrostis stolonifera, Allium cepa, Oryza sativa, Avena barbata, Avena sativa, Curcuma longa, Cynodon dactylon, Dioscorea alata, Elaeis guineensis, Eragrostis curvula, Festuca arundinacea, Festuca pratensis, Hordeum vulgare, Hordeum vulgare subsp. spontaneum, Leymus cinereus x Leymus triticoides, Lolium perenne, Musa ABB Group, Panicum virgatum, Pseudoroegneria spicata, Saccharum hybrid cultivar CoS 767, Saccharum hybrid cultivar SP70-1143, Saccharum officinarum, Sorghum propinquum, Triticum monococcum, Triticum turgidum subsp. durum, Zingiber officinale, Cenchrus ciliaris, Brachypodium distachyon, Zea mays, Triticum aestivum, Sorghum bicolor

ABOUT THIS RECORD

ID: MNEST046295
species: Elaeis guineensis
miRNA family: MIR528
source: microPC, original name: miR528

Taxonomy by NCBI:
Elaeis guineensis Elaeis Elaeidinae Cocoseae Arecoideae Arecaceae Arecales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms

SEQUENCE & STRUCTURE

miRNA
TGGAAGGGGCATGCAGAGGAG

miRNA*
CCTGTGCTTGCCTCCTCCA

mismatches: 4
bulges: 0

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pre-miRNA
TGGAAGGGGCATGCAGAGGAGAGGTCAAGATGGANNGAAAGAAAGCGATATTTTTCATCTCAGTGCTTCTTCTGGTGGCAAATTCCTGTGCTTGCCTCCT
CCA

dot-bracket secondary structure
.(((.((((((.(((.(((((..((((.((((((......(....).......)))))).(((........))).))))...))))).))).)))))).)
)).

UniProt no hits

RFAM no hits

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miRNEST target predictions
non-miRNEST targets: none
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