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Species belonging to selected taxon:

Euphorbia esula, Hevea brasiliensis, Jatropha curcas, Manihot esculenta, Ricinus communis



ABOUT THIS RECORD

ID: MNEST046317
species: Manihot esculenta
source: microPC, original name: miR319

Taxonomy by NCBI:
Manihot esculenta Manihot Manihoteae Crotonoideae Euphorbiaceae Malpighiales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TTGGATTGAAGGGAGCTC

miRNA*
 GCTCCTTAAAGTCCAATA

mismatches: 2
bulges: 0
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pre-miRNA
 GAGCTCCTTAAAGTCCAATAGAGGATCTTGCAGGGTAGATTGAGCTGCTGAGCTATGGATACCACAGCCCTATCCCATAATAAAAGGGAGTTCTTTTTTT
CAAGTCTTCTTGGATAGGCTTGTGGCTTGCATATCTCTGGAGCTTCATTACCTTATTATGTTAGATCCTTGTTTGGATTGAAGGGAGCTC

dot-bracket secondary structure
(((((((((..(((((((..((((((((.(((((((((...(((((.(.(((.((((.(..((((((.(((((((.........((((((..(((.....
.))).))))))))))))).))))))..).)))).))).).)))))..)))))).....))).))))))))..)))))))..)))))))))


SIMILARITIES
miRBase rco-MIR159: 5e-26

PMRD vvi-miR159c: 1e-20

microPC miR319: 7e-93		UniProt no hits

RFAM MIR159: 9e-25

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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