miRNEST 2.0, an integrative microRNA resource

miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Eschscholzia californica, Papaver somniferum

ABOUT THIS RECORD

ID: MNEST046319
species: Papaver somniferum
source: microPC, original name: miR1533

Taxonomy by NCBI:
Papaver somniferum Papaver Papaveraceae Ranunculales stem eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms

SEQUENCE & STRUCTURE

miRNA
TAATAAAATTAATAATG

miRNA*
TTATTAGTTTATATAAAT

mismatches: 3
bulges: 1

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pre-miRNA
TTATTAGTTTATATAAATAAAATCATTAGTAGGACCCAACTCTTATTAGTTTATGTTAATAAAATTAATAATG

dot-bracket secondary structure
((((((((((.(((.((((.((..((((((((((......)))))))))))).)))).)))))))))))))..

SIMILARITIES

miRBase no hits

PMRD no hits

microPC no hits

UniProt no hits

RFAM no hits

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
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