ABOUT THIS RECORDspecies: Eucalyptus gunnii
source: microPC, original name: miR157
Taxonomy by NCBI:
Eucalyptus gunnii Eucalyptus Myrtaceae Myrtales malvids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TTGATAGAAGATAGTGAGCA miRNA* TTTTCTGTTTTCTTTTACTT mismatches: 4 bulges: 0 |
pre-miRNA
TGTTTTCTGTTTTCTTTTACTTTTTACCTTATGTTGGTAGGATTACCTTGAAGAGGGATGAAGAATGACTTCTGGGTAGGGTAGTTACTCCAGCGCCGTA
GTGATTTGATAGAAGATAGTGAGCA
dot-bracket secondary structure
.((((.(((((((((.(((....((((....((((((...((((((((((.(((((............)))))...))))))))))...)))))).....
))))..))).))))))))).)))).
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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TGTTTTCTGTTTTCTTTTACTTTTTACCTTATGTTGGTAGGATTACCTTGAAGAGGGATGAAGAATGACTTCTGGGTAGGGTAGTTACTCCAGCGCCGTA
GTGATTTGATAGAAGATAGTGAGCA
dot-bracket secondary structure
.((((.(((((((((.(((....((((....((((((...((((((((((.(((((............)))))...))))))))))...)))))).....
))))..))).))))))))).)))).
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM no hits |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
download this record
