ABOUT THIS RECORDspecies: Eucalyptus gunnii
source: microPC, original name: miR169
Taxonomy by NCBI:
Eucalyptus gunnii Eucalyptus Myrtaceae Myrtales malvids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TAGCCAAGAATGAATTGCC miRNA* CAATTCATCCTTGGCT mismatches: 2 bulges: 0 |
pre-miRNA
TAGCCAAGAATGAATTGCCAACAGAAATTGGAGACTTGAAAGGCGTTCGCATTGAATTCCTAAAGTCGCCGGCAATTCATCCTTGGCT
dot-bracket secondary structure
.(((((((.((((((((((..........((.(((((...(((.((((.....)))).))).))))).)))))))))))).)))))))
SIMILARITIES
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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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TAGCCAAGAATGAATTGCCAACAGAAATTGGAGACTTGAAAGGCGTTCGCATTGAATTCCTAAAGTCGCCGGCAATTCATCCTTGGCT
dot-bracket secondary structure
.(((((((.((((((((((..........((.(((((...(((.((((.....)))).))).))))).)))))))))))).)))))))
SIMILARITIES| miRBase vvi-MIR169v: 0.000004 PMRD vvi-miR169v: 0.000004 microPC no hits | UniProt no hits RFAM MIR169_2: 0.00007 |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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