ABOUT THIS RECORDspecies: Hevea brasiliensis
source: microPC, original name: miR166
Taxonomy by NCBI:
Hevea brasiliensis Hevea Micrandreae Crotonoideae Euphorbiaceae Malpighiales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA CGGACCAGGCTTCATTCC miRNA* AATGTTGTCTGGTTCAAG mismatches: 3 bulges: 0 |
pre-miRNA
GGAATGTTGTCTGGTTCAAGGTCATGCGATGCTATACATATGATTTGTTTACCTTTTAGCTATTTCTCCTCGGACCAGGCTTCATTCC
dot-bracket secondary structure
((((((..(((((((((.(((....(.(((((((.(((.......)))........)))).))).).))).)))))))))..))))))
SIMILARITIES
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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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GGAATGTTGTCTGGTTCAAGGTCATGCGATGCTATACATATGATTTGTTTACCTTTTAGCTATTTCTCCTCGGACCAGGCTTCATTCC
dot-bracket secondary structure
((((((..(((((((((.(((....(.(((((((.(((.......)))........)))).))).).))).)))))))))..))))))
SIMILARITIES| miRBase rco-MIR166a: 0.000001 PMRD gma-miR166r: 0.000001 microPC miR166: 7e-45 | UniProt no hits RFAM mir-166: 0.00002 |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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