miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Euphorbia esula, Hevea brasiliensis, Jatropha curcas, Linum usitatissimum, Manihot esculenta, Populus deltoides, Populus euphratica, Populus nigra, Populus tremula, Populus tremula x Populus alba, Populus tremula x Populus tremuloides, Populus tremuloides, Populus trichocarpa x Populus nigra, Populus x canadensis, Bruguiera gymnorhiza, Populus trichocarpa, Ricinus communis, Populus trichocarpa x Populus deltoides



ABOUT THIS RECORD

ID: MNEST046387
species: Hevea brasiliensis
source: microPC, original name: miR166

Taxonomy by NCBI:
Hevea brasiliensis Hevea Micrandreae Crotonoideae Euphorbiaceae Malpighiales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 CGGACCAGGCTTCATTCC

miRNA*
 AATGTTGTCTGGTTCAAG

mismatches: 3
bulges: 0
View larger
pre-miRNA
 GGAATGTTGTCTGGTTCAAGGTCATGCGATGCTATACATATGATTTGTTTACCTTTTAGCTATTTCTCCTCGGACCAGGCTTCATTCC

dot-bracket secondary structure
((((((..(((((((((.(((....(.(((((((.(((.......)))........)))).))).).))).)))))))))..))))))


SIMILARITIES
miRBase rco-MIR166a: 0.000001

PMRD gma-miR166r: 0.000001

microPC miR166: 7e-45		UniProt no hits

RFAM mir-166: 0.00002

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
download this record




Liczniki na strone;