miRNEST 2.0, an integrative microRNA resource

miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Guizotia abyssinica, Helianthus argophyllus, Helianthus ciliaris, Helianthus exilis, Helianthus paradoxus, Helianthus petiolaris, Helianthus tuberosus, Parthenium argentatum, Zinnia violacea, Helianthus annuus

ABOUT THIS RECORD

ID: MNEST046442
species: Helianthus exilis
source: microPC, original name: miR171

Taxonomy by NCBI:
Helianthus exilis Helianthus Heliantheae Heliantheae alliance Asteroideae Asteraceae Asterales campanulids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms

SEQUENCE & STRUCTURE

miRNA
TTGAGCCGTGCCAATATCA

miRNA*
ATGTTGGTTCGGTTCAATA

mismatches: 2
bulges: 0

View larger

pre-miRNA
GATGTTGGTTCGGTTCAATAAGAACTCAATGTTCAAATAGTGCATTGAACGTTGCTTTTTGATTGAGCCGTGCCAATATCA

dot-bracket secondary structure
(((((((((.(((((((((.((((..((((((((((........))))))))))..)))).))))))))).))))))))).

UniProt no hits

RFAM MIR171_1: 0.00000002

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
download this record