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Species belonging to selected taxon:

Populus deltoides, Populus euphratica, Populus nigra, Populus tremula, Populus tremula x Populus alba, Populus tremula x Populus tremuloides, Populus tremuloides, Populus trichocarpa x Populus nigra, Populus x canadensis, Populus trichocarpa, Populus trichocarpa x Populus deltoides



ABOUT THIS RECORD

ID: MNEST046448
species: Populus x canadensis
source: microPC, original name: miR1444

Taxonomy by NCBI:
Populus x canadensis Populus Saliceae Salicaceae Malpighiales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TTCATATTCGGTCAACGTTC

miRNA*
 ATATTGATCGAATATGTATG

mismatches: 3
bulges: 0
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pre-miRNA
 GAATATTGATCGAATATGTATGAAATATGATGGTTATATGTTTCATTCATATTCGGTCAACGTTC

dot-bracket secondary structure
(((..(((((((((((((.((((((((((.......)))))))))).)))))))))))))..)))


SIMILARITIES
miRBase ptc-MIR1444b: 6e-29

PMRD ptc-miR1444b: 6e-29

microPC miR1444: 6e-29		UniProt no hits

RFAM MIR1444: 1e-27

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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