miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Guizotia abyssinica, Helianthus argophyllus, Helianthus ciliaris, Helianthus exilis, Helianthus paradoxus, Helianthus petiolaris, Helianthus tuberosus, Parthenium argentatum, Zinnia violacea, Artemisia annua, Helianthus annuus



ABOUT THIS RECORD

ID: MNEST046488
species: Helianthus annuus
source: microPC, original name: miR156

Taxonomy by NCBI:
Helianthus annuus Helianthus Heliantheae Heliantheae alliance Asteroideae Asteraceae Asterales campanulids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 CAGAAGATAGAGAGCACA

miRNA*
 TGCTCTCTATGCTTCTG

mismatches: 1
bulges: 1
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pre-miRNA
 GCAGAAGATAGAGAGCACAGAGAAGCATGAATTGCACATAGATATTGCAATTCACTCCTTCGTGCTCTCTATGCTTCTG

dot-bracket secondary structure
)(((((((((((((((((..((.((..(((((((((.........))))))))))).))..))))))))))).))))))


SIMILARITIES
miRBase ptc-MIR156i: 9.0E-7

PMRD han-miR157a: 5.0E-39

microPC miR157: 5.0E-39		UniProt no hits

RFAM no hits

Identical with: miR157 from microPC (MNEST045574), han-miR157a from PMRD

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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