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Species belonging to selected taxon:
Agrostis stolonifera
,
Allium cepa
,
Oryza sativa
,
Avena barbata
,
Avena sativa
,
Curcuma longa
,
Cynodon dactylon
,
Dioscorea alata
,
Elaeis guineensis
,
Eragrostis curvula
,
Festuca arundinacea
,
Festuca pratensis
,
Hordeum vulgare
,
Hordeum vulgare subsp. spontaneum
,
Leymus cinereus x Leymus triticoides
,
Lolium perenne
,
Musa ABB Group
,
Panicum virgatum
,
Pseudoroegneria spicata
,
Saccharum hybrid cultivar CoS 767
,
Saccharum hybrid cultivar SP70-1143
,
Saccharum officinarum
,
Sorghum propinquum
,
Triticum monococcum
,
Triticum turgidum subsp. durum
,
Zingiber officinale
,
Cenchrus ciliaris
,
Brachypodium distachyon
,
Zea mays
,
Triticum aestivum
,
Sorghum bicolor
ABOUT THIS RECORD
ID:
MNEST046489
species:
Oryza sativa
source:
microPC, original name:
miR160
Taxonomy by NCBI:
Oryza sativa
Oryza
Oryzeae
Ehrhartoideae
BEP clade
Poaceae
Poales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TGCCTGGCTCCCTGTATGCC
miRNA*
CGTGCGAGGAGCCAAGCA
mismatches:
3
bulges:
0
View larger
pre-miRNA
TGCCTGGCTCCCTGTATGCC
ACTCGCGTAGCTGCCAAACTCAGTTGAAACAACTGCCTTCTCCCGGCGAGATTCAGGCATTGTGTTCGTACGTTTGGCTC
TACTGCGGATGG
CGTGCGAGGAGCCAAGCA
dot-bracket secondary structure
.((.(((((((.((((((((
(..(((((((..(((((((.....((((((((.(((((((((.....))))...))))))))).))))...))))))).)
))).)))..)))
)))))).))))))).)).
SIMILARITIES
miRBase
osa-MIR160d
:
9e-70
PMRD
osa-miR160n
:
9e-70
microPC
miR160
:
9e-70
UniProt
no hits
RFAM
mir-160: 2e-68
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
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