ABOUT THIS RECORDspecies: Centaurea solstitialis
source: microPC, original name: miR866
Taxonomy by NCBI:
Centaurea solstitialis Centaurea Centaureinae Cardueae Carduoideae Asteraceae Asterales campanulids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA ACAAATTCCATCTTTGAAG miRNA* TGATAATTGTGAGAGTTTG mismatches: 3 bulges: 3 |
pre-miRNA
ACAAATTCCATCTTTGAAGTTTTTAGTGATGGCGGTGGATGCCCCATGCTTAAATCATTAGTTCTTGATAATTGTGAGAGTTTG
dot-bracket secondary structure
.((((((((((..((((((...((((((((((((.(((.....)))))))...))))))))..)))..)))..))).)))))))
SIMILARITIES
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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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ACAAATTCCATCTTTGAAGTTTTTAGTGATGGCGGTGGATGCCCCATGCTTAAATCATTAGTTCTTGATAATTGTGAGAGTTTG
dot-bracket secondary structure
.((((((((((..((((((...((((((((((((.(((.....)))))))...))))))))..)))..)))..))).)))))))
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt sp|Q9SMY8|FBL15_ARATH: 0.000002 RFAM no hits |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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