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Species belonging to selected taxon:
Manihot esculenta
ABOUT THIS RECORD
ID:
MNEST046504
species:
Manihot esculenta
miRNA family:
MIR162
source:
microPC, original name:
miR162
Taxonomy by NCBI:
Manihot esculenta
Manihot
Manihoteae
Crotonoideae
Euphorbiaceae
Malpighiales
fabids
rosids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TCGATAAACCTCTGCATCCA
miRNA*
GAGGCAGCGGTTCATCGATC
mismatches:
4
bulges:
0
View larger
pre-miRNA
TG
GAGGCAGCGGTTCATCGATC
TCTTCCTGGAGGATTTTGTTGTGAAATTAGCACAAACACATGAATCGA
TCGATAAACCTCTGCATCCA
dot-bracket secondary structure
.(
((.((((.((((.(((((((
...(((....)))...(((((((.......))).))))........))
))))).)))).)))).))).
SIMILARITIES
miRBase
ghr-MIR162a
:
2e-29
PMRD
ghr-miR162a
:
2e-29
microPC
miR162
:
4e-46
UniProt
no hits
RFAM
MIR162_2: 6e-24
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
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