ABOUT THIS RECORDspecies: Paullinia cupana var. sorbilis
source: microPC, original name: miR164
Taxonomy by NCBI:
Paullinia cupana var. sorbilis Paullinia cupana Paullinia Sapindaceae Sapindales malvids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TGGAGAAGCAGGGCACGTGC miRNA* ATGTGCCCCTCTTCCCCA mismatches: 5 bulges: 0 |
pre-miRNA
TGGAGAAGCAGGGCACGTGCATTACTAACTCACCAACCATAAAAAACACTGACACATAAATTCAATTGATTGAGTTAGTTCTTCATGTGCCCCTCTTCCC
CA
dot-bracket secondary structure
.((.((((..(((((((((....(((((((((.(((.............................)))..)))))))))....)))))))))..)))).)
).
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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TGGAGAAGCAGGGCACGTGCATTACTAACTCACCAACCATAAAAAACACTGACACATAAATTCAATTGATTGAGTTAGTTCTTCATGTGCCCCTCTTCCC
CA
dot-bracket secondary structure
.((.((((..(((((((((....(((((((((.(((.............................)))..)))))))))....)))))))))..)))).)
).
SIMILARITIES| miRBase mtr-MIR164b: 0.000000000001 PMRD mtr-miR164b: 0.000000000001 microPC miR164: 4e-53 | UniProt no hits RFAM MIR164: 0.00000000002 |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
download this record
