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Species belonging to selected taxon:

Agrostis stolonifera, Oryza sativa, Avena barbata, Avena sativa, Festuca arundinacea, Festuca pratensis, Hordeum vulgare, Hordeum vulgare subsp. spontaneum, Leymus cinereus x Leymus triticoides, Lolium perenne, Pseudoroegneria spicata, Triticum monococcum, Triticum turgidum subsp. durum, Brachypodium distachyon, Triticum aestivum



ABOUT THIS RECORD

ID: MNEST046529
species: Oryza sativa
miRNA family: MIR806
source: microPC, original name: miR806

Taxonomy by NCBI:
Oryza sativa Oryza Oryzeae Ehrhartoideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 ATGTGCTAAAAAGTCAACGGTG

miRNA*
 CCGTTGACATTTTAAGCACATGT

mismatches: 1
bulges: 1
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pre-miRNA
 CGCCGTTGACATTTTAAGCACATGTTTGACCGTTCGTCTTATTCAAAAAATTTAAGTAATTATTAATTCTTTTCCTATCATTTGATTCATTGTTAAATAT
ATTTTCATGCAGGCATATAATTTTACATATTTCACAAAAGTTTTTGAATAAGATGAACGGTTAAATATGTGCTAAAAAGTCAACGGTG

dot-bracket secondary structure
((((((((((.((((.(((((((((((((((((((((((((((((((((.(((..........................(((((((.....)))))))..
......(((....)))....................))).))))))))))))))))))))))))))))))))).))))))))))))))


SIMILARITIES
miRBase osa-MIR806h: 1e-75

PMRD osa-miR806h: 1e-75

microPC miR806: 3e-104		UniProt no hits

RFAM MIR806: 3e-80

MORE

miRNEST target predictions
non-miRNEST targets
HuntMi prediction: true miRNA
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