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Species belonging to selected taxon:
Oryza sativa
ABOUT THIS RECORD
ID:
MNEST004660
species:
Oryza sativa
miRNA family:
MIR156
source:
miRNEST
Taxonomy by NCBI:
Oryza sativa
Oryza
Oryzeae
Ehrhartoideae
BEP clade
Poaceae
Poales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TGACAGAAGAGAGTGAGCACA
miRNA*
TGCTCACTCTCTATCTGTCAGC
mismatches:
1
bulges:
1
View larger
pre-miRNA
TGGGAGNTC
TGACAGAAGAGAGTGAGCACA
CACGGTGCTTTCTTAGCATGCAAGAGCCNATGCTGGGAGCTGTGCG
TGCTCACTCTCTATCTGTCAGC
CC
GTTC
dot-bracket secondary structure
((((....(
((((((((((((((((((((.
((((((....(((((((((((....))..))))))))))))))).)
)))))))))))).)))))))))
))
)...
SIMILARITIES
miRBase
osa-MIR156b
:
1e-43
PMRD
osa-miR156b
:
1e-43
microPC
miR156
:
2e-39
UniProt
no hits
RFAM
mir-156: 2e-39
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
Source sequences
download this record