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Species belonging to selected taxon:
Arabidopsis thaliana
ABOUT THIS RECORD
ID:
MNEST046629
species:
Arabidopsis thaliana
source:
microPC, original name:
miR160
Taxonomy by NCBI:
Arabidopsis thaliana
Arabidopsis
Brassicaceae
Brassicales
malvids
rosids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
GCCTGGCTCCCTGTATGCC
miRNA*
CGTACAAGGAGTCAAGC
mismatches:
2
bulges:
0
View larger
pre-miRNA
GCCTGGCTCCCTGTATGCC
ACGAGTGGATACCGATTTTGGTTTTAAAATCGGCTGCCGGTGG
CGTACAAGGAGTCAAGC
dot-bracket secondary structure
((.(((((((.((((((((
((..(..(...(((((((((....))))))))))..)..))))
)))))).))))))).))
SIMILARITIES
miRBase
ath-MIR160c
:
1e-39
PMRD
ath-miR160c
:
1e-39
microPC
miR160
:
1e-39
UniProt
no hits
RFAM
mir-160: 2e-38
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
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