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Species belonging to selected taxon:

Antirrhinum majus, Coffea canephora, Fraxinus excelsior, Ipomoea batatas, Mimulus guttatus, Mimulus guttatus var. nasutus, Mimulus lewisii, Nicotiana benthamiana, Nicotiana langsdorffii x Nicotiana sanderae, Nicotiana tabacum, Ocimum basilicum, Petunia axillaris subsp. axillaris, Salvia miltiorrhiza, Solanum habrochaites, Solanum lycopersicum, Solanum melongena, Solanum pennellii, Solanum torvum, Striga hermonthica, Triphysaria pusilla, Triphysaria versicolor, Capsicum annuum, Catharanthus roseus, Solanum tuberosum, Ipomoea nil



ABOUT THIS RECORD

ID: MNEST046631
species: Catharanthus roseus
source: microPC, original name: miR169

Taxonomy by NCBI:
Catharanthus roseus Catharanthus Vinceae Rauvolfioideae Apocynaceae Gentianales lamiids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 AGCCAAGGATGACTTGCC

miRNA*
 CAAGTTGTCTTTGGCT

mismatches: 2
bulges: 0
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pre-miRNA
 AGCCAAGGATGACTTGCCGACTGTTTTGCCGAGCGCGGAAATAAAATGCAGCTTTCTCTCTCTCTCTCTCTGTATATTTGCCGCCGTACGTATTTATACG
AACTCCTCGGCAAGTTGTCTTTGGCT

dot-bracket secondary structure
(((((((((..(((((((((..............(((((((((...(((((..................)))))))))).)))).((.((((....))))
.))...)))))))))..)))))))))


SIMILARITIES
miRBase vvi-MIR169g: 0.00002

PMRD vvi-miR169g: 0.00002

microPC miR169: 6e-37		UniProt no hits

RFAM MIR169_2: 0.0001

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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