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Species belonging to selected taxon:
Oryza sativa
ABOUT THIS RECORD
ID:
MNEST046637
species:
Oryza sativa
miRNA family:
MIR446
source:
microPC, original name:
miR446
Taxonomy by NCBI:
Oryza sativa
Oryza
Oryzeae
Ehrhartoideae
BEP clade
Poaceae
Poales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
CATCAATATGAATATGGGAAA
miRNA*
TCCTAGTTCATATTAATGTT
mismatches:
2
bulges:
1
View larger
pre-miRNA
T
TCCTAGTTCATATTAATGTT
AATGAATCTAGACATATATATCTAGCTAGATTCATTAA
CATCAATATGAATATGGGAAA
dot-bracket secondary structure
(
((((((((((((((.(((((
(((((((((((...((......)).)))))))))))))
))).))))))))).)))))).
SIMILARITIES
miRBase
osa-MIR808
:
2e-26
PMRD
osa-miR808
:
2e-26
microPC
miR809
:
3e-22
UniProt
no hits
RFAM
MIR1122: 9e-26
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
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