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Species belonging to selected taxon:
Oryza sativa
ABOUT THIS RECORD
ID:
MNEST046708
species:
Oryza sativa
source:
microPC, original name:
miR169
Taxonomy by NCBI:
Oryza sativa
Oryza
Oryzeae
Ehrhartoideae
BEP clade
Poaceae
Poales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
AGCCAAGGATGACTTGCC
miRNA*
CAAGTTGTTCTTGGCT
mismatches:
2
bulges:
0
View larger
pre-miRNA
AGCCAAGGATGACTTGCC
GATCGATCGATCTATCTATGAAGCTAAGCTAGCTGGCCATGGATCCATCCATCAATTGG
CAAGTTGTTCTTGGCT
dot-bracket secondary structure
(((((((((..(((((((
(((.(((.(((..(((((((.(((((...)))))...)))))))..))).))).)))))
)))))..)))))))))
SIMILARITIES
miRBase
osa-MIR169a
:
7e-48
PMRD
osa-miR169a
:
7e-48
microPC
miR169
:
7e-48
UniProt
no hits
RFAM
MIR169_2: 1e-46
Identical with:
osa-miR169a
from PMRD (
MNEST048876
)
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
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