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Species belonging to selected taxon:
Agrostis stolonifera
,
Oryza sativa
,
Avena barbata
,
Avena sativa
,
Festuca arundinacea
,
Festuca pratensis
,
Hordeum vulgare
,
Hordeum vulgare subsp. spontaneum
,
Leymus cinereus x Leymus triticoides
,
Lolium perenne
,
Pseudoroegneria spicata
,
Triticum monococcum
,
Triticum turgidum subsp. durum
,
Brachypodium distachyon
,
Triticum aestivum
ABOUT THIS RECORD
ID:
MNEST046720
species:
Oryza sativa
source:
microPC, original name:
miR169
Taxonomy by NCBI:
Oryza sativa
Oryza
Oryzeae
Ehrhartoideae
BEP clade
Poaceae
Poales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
AGCCAAGGATGACTTGCCG
miRNA*
GCAAGTTGTCCTTGGCT
mismatches:
2
bulges:
0
View larger
pre-miRNA
AGCCAAGGATGACTTGCCG
GTACGTGTATGCATGTTTCAAGGTACTATATGTGCCCCCAACTGTTTTAGATCCATGCTGACATTTTCCG
GCAAGTTGTCC
TTGGCT
dot-bracket secondary structure
(((((((((..((((((((
(...((((..(((((..((..(((((.....)))))..(....).....))..)))))..))))...)))
))))))..)))
))))))
SIMILARITIES
miRBase
osa-MIR169b
:
2e-55
PMRD
osa-miR169b
:
2e-55
microPC
miR169
:
2e-55
UniProt
no hits
RFAM
MIR169_2: 3e-54
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
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