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Species belonging to selected taxon:

Cucumis melo subsp. melo



ABOUT THIS RECORD

ID: MNEST046724
species: Cucumis melo subsp. melo
miRNA family: MIR319
source: microPC, original name: miR319

Taxonomy by NCBI:
Cucumis melo subsp. melo Cucumis melo Cucumis Cucurbitaceae Cucurbitales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
CTTGGACTGAAGGGAGCTCC

miRNA*
AGCTTTCTTCAGTCCACTCA

mismatches: 5
bulges: 0

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pre-miRNA
GAGCTTTCTTCAGTCCACTCATGGGTGGCGGTAGGGTTTAATTAGCTGCCGACTCATTCATTCAAATATTGAGTCCAAAAATTTCAAATCTCAAATGGAT
TCACTAAACGATTGAATGATGCGGGAGACAAATTGAATCTTAAGCTTCCTGTACTTGGACTGAAGGGAGCTCC


dot-bracket secondary structure
(((((..((((((((((...(((((.(((..((((((((((((.(((.(((..(((((((.((...((.((((((((..................)))))
))).))...)).)))))))..))).)).).)))))))))))).))).)))))...))))))))))..))))).



SIMILARITIES
miRBase ptc-MIR319a: 1e-29

PMRD ptc-miR319a: 1e-29

microPC miR319: 3e-95
UniProt no hits

RFAM MIR159: 2e-28

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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