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Species belonging to selected taxon:

Oryza sativa



ABOUT THIS RECORD

ID: MNEST046793
species: Oryza sativa
miRNA family: MIR1425
source: microPC, original name: miR1425

Taxonomy by NCBI:
Oryza sativa Oryza Oryzeae Ehrhartoideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TAGGATTCAATCCTTGCTGCT

miRNA*
 CAGCAAGAACTGGATCTTA

mismatches: 3
bulges: 0
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pre-miRNA
 TAGGATTCAATCCTTGCTGCTAAATGTATTGCTTATATTCAGCAATATAATGTTCAGCAGCAAGAACTGGATCTTA

dot-bracket secondary structure
(((((((((...(((((((((((.(((((((((.......)))))))))...)).)))))))))...)))))))))


SIMILARITIES
miRBase osa-MIR1425: 8e-38

PMRD osa-miR1425: 8e-38

microPC no hits		UniProt no hits

RFAM no hits

Identical with: osa-MIR1425 from miRBase (MNEST042200)

MORE

miRNEST target predictions
non-miRNEST targets
HuntMi prediction: true miRNA
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deep sequencing data evidence




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