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Species belonging to selected taxon:

Agrostis stolonifera, Allium cepa, Oryza sativa, Avena barbata, Avena sativa, Curcuma longa, Cynodon dactylon, Dioscorea alata, Elaeis guineensis, Eragrostis curvula, Festuca arundinacea, Festuca pratensis, Hordeum vulgare, Hordeum vulgare subsp. spontaneum, Leymus cinereus x Leymus triticoides, Lolium perenne, Musa ABB Group, Panicum virgatum, Pseudoroegneria spicata, Saccharum hybrid cultivar CoS 767, Saccharum hybrid cultivar SP70-1143, Saccharum officinarum, Sorghum propinquum, Triticum monococcum, Triticum turgidum subsp. durum, Zingiber officinale, Cenchrus ciliaris, Brachypodium distachyon, Zea mays, Triticum aestivum, Sorghum bicolor



ABOUT THIS RECORD

ID: MNEST046795
species: Elaeis guineensis
miRNA family: MIR398
source: microPC, original name: miR398

Taxonomy by NCBI:
Elaeis guineensis Elaeis Elaeidinae Cocoseae Arecoideae Arecaceae Arecales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TGTGTTCTCAGGTCGCCCCTG

miRNA*
 GGGGCGACCTGCGACCACACG

mismatches: 2
bulges: 0
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pre-miRNA
 CAGGGGCGACCTGCGACCACACGAGCTGAAGTCCTTCATCGAAATCTCGTCCCTCGATTGCTGCAATCGGACGGTGCCCGTGTGTTCTCAGGTCGCCCCT
G

dot-bracket secondary structure
(((((((((((((.((.((((((.((.(((....))).........((((((...(((((...))))))))))).)).)))))).)).))))))))))))
)


SIMILARITIES
miRBase osa-MIR398b: 0.000005

PMRD osa-miR398b: 0.000005

microPC miR398: 2e-51		UniProt no hits

RFAM MIR398: 0.00009

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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