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Species belonging to selected taxon:

Agrostis stolonifera, Oryza sativa, Avena barbata, Avena sativa, Curcuma longa, Cynodon dactylon, Elaeis guineensis, Eragrostis curvula, Festuca arundinacea, Festuca pratensis, Hordeum vulgare, Hordeum vulgare subsp. spontaneum, Leymus cinereus x Leymus triticoides, Lolium perenne, Musa ABB Group, Panicum virgatum, Pseudoroegneria spicata, Saccharum hybrid cultivar CoS 767, Saccharum hybrid cultivar SP70-1143, Saccharum officinarum, Sorghum propinquum, Triticum monococcum, Triticum turgidum subsp. durum, Zingiber officinale, Cenchrus ciliaris, Brachypodium distachyon, Zea mays, Triticum aestivum, Sorghum bicolor



ABOUT THIS RECORD

ID: MNEST004680
species: Oryza sativa
miRNA family: MIR166
source: miRNEST

Taxonomy by NCBI:
Oryza sativa Oryza Oryzeae Ehrhartoideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TCGGATCAGGCTTCATTCCTC

miRNA*
 GGAATGCAGTTTGATCCAAGA

mismatches: 4
bulges: 0
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pre-miRNA
 TGATTGAGAGAGATAGGTGTTNGGAATGCAGTTTGATCCAAGATCTGCCTATATATATGGTGTGTATATCATATCTTGTGATATGGGGGATATGCAACAA
GTGTGTGACAGGGGTGGGTAGATCTCGGATCAGGCTTCATTCCTCACACCAATACTCTCTGTTG

dot-bracket secondary structure
......((((((((.(((((..((((((.((((((((((.((((((((((((((((.((.(((((((.(((((((....)))))))...))))))).)).
)))))).((....)))))))))))).)))))))))).))))))..))))).)).))))))....


SIMILARITIES
miRBase osa-MIR166i: 5e-72

PMRD osa-miR166i: 5e-72

microPC miR166: 0.00003		UniProt no hits

RFAM mir-166: 8e-65		most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets
Source sequences
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