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Species belonging to selected taxon:
Arabidopsis thaliana
ABOUT THIS RECORD
ID:
MNEST047127
species:
Arabidopsis thaliana
miRNA family:
MIRf16
source:
PMRD, original name:
ath-miRf10027-akr
Taxonomy by NCBI:
Arabidopsis thaliana
Arabidopsis
Brassicaceae
Brassicales
malvids
rosids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TACTCGACCTCGGGGTCGAGT
miRNA*
TCGACCTCGTGGTCGAGTGGT
mismatches:
1
bulges:
0
View larger
pre-miRNA
GGAGACGC
TCGACCTCGTGGTCGAGTGGT
GAGGTGAAGTGGTGATGTCTTC
TACTCGACCTCGGGGTCGAGT
GGTCTCT
dot-bracket secondary structure
((((((((
(((((((((.((((((((((.
((.((.(.....).)).))..)
))))))))).)))))))))))
.))))))
SIMILARITIES
miRBase
no hits
PMRD
ath-miRf10666-akr
:
1e-39
microPC
no hits
UniProt
no hits
RFAM
MIR854: 0.00006
Identical with:
ath-miRf10666-akr
from PMRD (
MNEST047766
)
MORE
miRNEST target predictions: none
non-miRNEST targets
HuntMi prediction:
true miRNA
additional data
download this record