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Species belonging to selected taxon:

Arabidopsis thaliana



ABOUT THIS RECORD

ID: MNEST047282
species: Arabidopsis thaliana
source: PMRD, original name: ath-miRf10182-akr

Taxonomy by NCBI:
Arabidopsis thaliana Arabidopsis Brassicaceae Brassicales malvids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
AACGGCGTGAGTGCCGTAGA

miRNA*
CATGGCACTGACGCCGTTCA

mismatches: 2
bulges: 0

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pre-miRNA
AGATCATCATCCATGGCACTGACGCCGTTCACGGCAACTGCCGTAGACGTTGTTGTTGCCGTGAACGGCGTGAGTGCCGTAGATTATTGGCT

dot-bracket secondary structure
...(((..(((.((((((((.(((((((((((((((((.((((....))..)).))))))))))))))))).)))))))).)))...)))..


SIMILARITIES
miRBase no hits

PMRD ath-miRf10502-akr: 1e-37

microPC no hits
UniProt no hits

RFAM no hits

Identical with: ath-miRf10502-akr from PMRD (MNEST047602)

MORE

miRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
degradome data
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