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Species belonging to selected taxon:
Arabidopsis thaliana
ABOUT THIS RECORD
ID:
MNEST047347
species:
Arabidopsis thaliana
source:
PMRD, original name:
ath-miRf10247-akr
Taxonomy by NCBI:
Arabidopsis thaliana
Arabidopsis
Brassicaceae
Brassicales
malvids
rosids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
ATGTGCCCATCTTCACCATC
miRNA*
TGGAGAAGCAGGGCACGTGC
mismatches:
3
bulges:
0
View larger
pre-miRNA
CAAGA
TGGAGAAGCAGGGCACGTGC
ATTACTAGCTCATATATACACTCTCACCACAAATGCGTGTATATATGCGGAATTTTGTGATATAGATGTGTGTGT
GTGTTGAGTGTGATGATATGGATGAGTTAGTTCTTC
ATGTGCCCATCTTCACCATC
ATG
dot-bracket secondary structure
...((
(((.((((..(((((((((.
...((((((((((.(((((((.((((.((((.((((((.(((((.(((((....)))))))))).))))))...)
))).)))).)))....)))).))))))))))....)
))))))))..)))).)))))
...
SIMILARITIES
miRBase
ath-MIR164b
:
4e-60
PMRD
ath-miR164b
:
4e-60
microPC
miR164
:
0.000000002
UniProt
no hits
RFAM
MIR164: 2e-62
MORE
miRNEST target predictions: none
non-miRNEST targets
HuntMi prediction:
true miRNA
additional data
degradome data
download this record