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Species belonging to selected taxon:
Arabidopsis thaliana
ABOUT THIS RECORD
ID:
MNEST047396
species:
Arabidopsis thaliana
miRNA family:
MIRf16
source:
PMRD, original name:
ath-miRf10296-akr
Taxonomy by NCBI:
Arabidopsis thaliana
Arabidopsis
Brassicaceae
Brassicales
malvids
rosids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TACTCGACCAGGGGGTCGAGT
miRNA*
TCGACCACGAGGTCGAGTGGT
mismatches:
4
bulges:
0
View larger
pre-miRNA
GATGATGATAC
TCGACCACGAGGTCGAGTGGT
TGTGTGAAGTGGTGAGGCCTTC
TACTCGACCAGGGGGTCGAGT
GGTTTGTT
dot-bracket secondary structure
((..(...(((
((((((....((((((((((.
.((.(.(.....).).))...)
)))))))))....))))))))
)..)..))
SIMILARITIES
miRBase
no hits
PMRD
ath-miRf10894-akr
:
4e-37
microPC
no hits
UniProt
no hits
RFAM
no hits
MORE
miRNEST target predictions: none
non-miRNEST targets
HuntMi prediction:
true miRNA
additional data
download this record