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Species belonging to selected taxon:
Arabidopsis thaliana
ABOUT THIS RECORD
ID:
MNEST047504
species:
Arabidopsis thaliana
source:
PMRD, original name:
ath-miRf10404-akr
Taxonomy by NCBI:
Arabidopsis thaliana
Arabidopsis
Brassicaceae
Brassicales
malvids
rosids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
CCATTTTGTGGGGACTGAGA
miRNA*
TCACTCCCCACAAAATGGAA
mismatches:
1
bulges:
0
View larger
pre-miRNA
GAATCTCTATT
TCACTCCCCACAAAATGGAA
GTTAATGTCCAGTTTTTCCCTAAATCGAAAGTTTGAATTCTAAGAGTTCGTAAGACTTGTTCGTTTGAT
TTGATCTATAATGAAATTGGACTTTAACTT
CCATTTTGTGGGGACTGAGA
TAGACATTC
dot-bracket secondary structure
((((.((((((
(((.((((((((((((((((
(((((.((((((((((....((.((((((.(..(((((.....((((.(....))))))))))..)..)
))))).))....)))))))))).)))))))
)))))))))))))).)))))
)))).))))
SIMILARITIES
miRBase
no hits
PMRD
ath-miRf10734-akr
:
6e-87
microPC
no hits
UniProt
no hits
RFAM
no hits
Identical with:
ath-miRf10734-akr
from PMRD (
MNEST047834
)
MORE
miRNEST target predictions: none
non-miRNEST targets
HuntMi prediction:
true miRNA
additional data
download this record