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Species belonging to selected taxon:
Arabidopsis thaliana
ABOUT THIS RECORD
ID:
MNEST047593
species:
Arabidopsis thaliana
source:
PMRD, original name:
ath-miRf10493-akr
Taxonomy by NCBI:
Arabidopsis thaliana
Arabidopsis
Brassicaceae
Brassicales
malvids
rosids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
GCGATGGTGTCGATCGACACTG
miRNA*
GTGTCGGTCGACACTATCAATG
mismatches:
4
bulges:
0
View larger
pre-miRNA
GGTG
GTGTCGGTCGACACTATCAATG
TGTGTCGAGCGATTCTGGAGATTAATGTCCAGCCTGGTCGATTCTACTTCGTCACAGCCTGATGTCTCGTATAT
AT
GCGATGGTGTCGATCGACACTG
CC
dot-bracket secondary structure
((..
((((((((((((((((((.(((
((((.((((((...(((((.(....).))))).((((.(((.......))).).))).....)).)))))))))
))
..))))))))))))))))))..
))
SIMILARITIES
miRBase
no hits
PMRD
ath-miRf10423-akr
:
2e-49
microPC
no hits
UniProt
no hits
RFAM
no hits
MORE
miRNEST target predictions: none
non-miRNEST targets
HuntMi prediction:
true miRNA
additional data
download this record