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Species belonging to selected taxon:
Brassica napus
,
Brassica oleracea var. alboglabra
,
Brassica rapa
,
Limnanthes alba
,
Raphanus raphanistrum
,
Raphanus raphanistrum subsp. landra
,
Raphanus raphanistrum subsp. maritimus
,
Raphanus sativus
,
Raphanus sativus var. oleiformis
,
Thellungiella halophila
,
Tropaeolum majus
,
Carica papaya
,
Arabidopsis thaliana
,
Brassica oleracea
ABOUT THIS RECORD
ID:
MNEST047974
species:
Arabidopsis thaliana
source:
PMRD, original name:
ath-miRf10874-akr
Taxonomy by NCBI:
Arabidopsis thaliana
Arabidopsis
Brassicaceae
Brassicales
malvids
rosids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
ACTCGACCCCCAGGTCGAGCA
miRNA*
CTCGACCCCCAGGTCGAGTGC
mismatches:
5
bulges:
0
View larger
pre-miRNA
GAGACC
ACTCGACCCCCAGGTCGAGCA
TAGGACATCACCACTTCACTTCACCACTCGACCTCTTCACTCCACCTGGAAGTCGAGTATCTTCTGACACCAC
TCGATCACCTCG
CTCGACCCCCAGGTCGAGTGC
TTTC
dot-bracket secondary structure
((((.(
((((((((....((((((((.
.(((..(((................(((((((.(((...........))).))))))).((....))......
..)))..))).)
)))))))....))))))))).
))))
SIMILARITIES
miRBase
no hits
PMRD
ath-miRf10607-akr
:
6e-74
microPC
no hits
UniProt
no hits
RFAM
no hits
Identical with:
ath-miRf10607-akr
from PMRD (
MNEST047707
)
MORE
miRNEST target predictions: none
non-miRNEST targets
HuntMi prediction:
true miRNA
additional data
download this record