ABOUT THIS RECORDspecies: Arabidopsis thaliana
source: PMRD, original name: ath-miRf11066-akr
Taxonomy by NCBI:
Arabidopsis thaliana Arabidopsis Brassicaceae Brassicales malvids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TCCTCGCAAAATTTGCGAGGGA miRNA* CCTCGCAATGTTTGCGATGGA mismatches: 2 bulges: 1 |
pre-miRNA
TCCTCGCAAAATTTGCGAGGGATTTGCAATGAATATTTCTGTAGCAAACCTGCGAGGGAGTTGCAAGTTCCAGCGTTCGTAGTAGCAAATCCCTCGCAAT
GTTTGCGATGGA
dot-bracket secondary structure
((((((((((..(((((((((((((((......(((....)))......(((((((...((((.......)))).)))))))..))))))))))))))).
.))))))).)))
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
download this record
TCCTCGCAAAATTTGCGAGGGATTTGCAATGAATATTTCTGTAGCAAACCTGCGAGGGAGTTGCAAGTTCCAGCGTTCGTAGTAGCAAATCCCTCGCAAT
GTTTGCGATGGA
dot-bracket secondary structure
((((((((((..(((((((((((((((......(((....)))......(((((((...((((.......)))).)))))))..))))))))))))))).
.))))))).)))
SIMILARITIES| miRBase no hits PMRD ath-miRf10149-akr: 4e-59 microPC no hits | UniProt no hits RFAM no hits |
Identical with: ath-miRf10149-akr from PMRD (MNEST047249) |
MOREmiRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
download this record
