miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Cucumis melo subsp. melo



ABOUT THIS RECORD

ID: MNEST000482
species: Cucumis melo subsp. melo
miRNA family: MIR2673
source: miRNEST

Taxonomy by NCBI:
Cucumis melo subsp. melo Cucumis melo Cucumis Cucurbitaceae Cucurbitales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TCTCTTCCTCTTCCTCTTCTT

miRNA*
 AGAGAGAGAGAGAGGGAGGGA

mismatches: 3
bulges: 0
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pre-miRNA
 AATTTCCCTCAACCCAGTTTTCCCTTTTCTCTCTCTTCCTCTTCCTCTTCTTCTACTTCCAACCCAAAGAACACATATATATCTCTAAAAAGTTGAACCC
AAAAGTAGAATTCCAACGAGCAAGCAACCCATTTTTCAGTTTTTTAGAAAAAACCAGATTTTATTGAGAGAAGAAAGAGAAAGGGGTTGCTCTAATGAGA
GATTTCTTTCAGCAATTCAGCATGTAGCTGAGGGGGAAGCTTGCAAGTAGAGAGAGAGAGAGAGAGGGAGGGAGGGAGGGAGAAAACCCTTGTCTCAAAT
G

dot-bracket secondary structure
................(((((((((((((((((((((.(((((.(((((.((((((((.((((((..(((.............))).....((((.....
.............))))..((.((((((((.((((((..((((((.((.((((.....)))).))...))))))..)))))).))))))))....(((((
(....))))))))..((((((.....)))))).)))....))).)))))))).))))).))))).))))))))))))))).)))))).............
.


SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits		UniProt no hits

RFAM no hits		most similar mature miRNAs

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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