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Species belonging to selected taxon:
Brassica napus
,
Brassica oleracea var. alboglabra
,
Brassica rapa
,
Raphanus raphanistrum
,
Raphanus raphanistrum subsp. landra
,
Raphanus raphanistrum subsp. maritimus
,
Raphanus sativus
,
Raphanus sativus var. oleiformis
,
Thellungiella halophila
,
Arabidopsis thaliana
,
Brassica oleracea
ABOUT THIS RECORD
ID:
MNEST048255
species:
Arabidopsis thaliana
source:
PMRD, original name:
ath-miRf11155-akr
Taxonomy by NCBI:
Arabidopsis thaliana
Arabidopsis
Brassicaceae
Brassicales
malvids
rosids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TACTCGACCAGGGGGTCGAGTGG
miRNA*
ACTCAACCTCGGGGTCGAGTGGT
mismatches:
3
bulges:
0
View larger
pre-miRNA
GTCCTC
TACTCGACCAGGGGGTCGAGTGG
TCTCTTGAGGTCTTGAAGCTTCT
ACTCAACCTCGGGGTCGAGTGGT
TTGAC
dot-bracket secondary structure
(((..(
(((((((((..(((((.((((((
...(((.((...)).)))...))
)))).)))))..)))))))))).
..)))
SIMILARITIES
miRBase
no hits
PMRD
ath-miRf11154-akr
:
9e-38
microPC
no hits
UniProt
no hits
RFAM
no hits
MORE
miRNEST target predictions: none
non-miRNEST targets
HuntMi prediction:
true miRNA
additional data
download this record