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Species belonging to selected taxon:

Agrostis stolonifera, Oryza sativa, Avena barbata, Avena sativa, Cynodon dactylon, Eragrostis curvula, Festuca arundinacea, Festuca pratensis, Hordeum vulgare, Hordeum vulgare subsp. spontaneum, Leymus cinereus x Leymus triticoides, Lolium perenne, Panicum virgatum, Pseudoroegneria spicata, Saccharum hybrid cultivar CoS 767, Saccharum hybrid cultivar SP70-1143, Saccharum officinarum, Sorghum propinquum, Triticum monococcum, Triticum turgidum subsp. durum, Cenchrus ciliaris, Brachypodium distachyon, Zea mays, Triticum aestivum, Sorghum bicolor



ABOUT THIS RECORD

ID: MNEST048308
species: Brachypodium distachyon
miRNA family: MIR167
source: PMRD, original name: bdi-miR167

Taxonomy by NCBI:
Brachypodium distachyon Brachypodium Brachypodieae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TGAAGCTGCCAGCATGATCTA

miRNA*
GACTTGTGGTGGCAAGTGCCACA

mismatches: 7
bulges: 2

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pre-miRNA
AGAGAAAGCGTGAAGCTGCCAGCATGATCTATCTGACTTGTGGTGGCAAGTGCCACAGCAAATTCAGCAACGCCGTGGCTTCGGGGCCGGC

dot-bracket secondary structure
.(((...(((((..(((((((.((..(((.....)).)..)).)))).)))..))).))...)))......(((..((((....)))))))


SIMILARITIES
miRBase bdi-MIR167a: 1e-46

PMRD osa-miR167b: 0.00000000007

microPC miR167: 0.00007
UniProt no hits

RFAM MIR167_1: 0.000000001

Identical with: bdi-MIR167a from miRBase (MNEST041749)

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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deep sequencing data evidence





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