miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Brassica oleracea var. alboglabra, Brassica oleracea



ABOUT THIS RECORD

ID: MNEST048385
species: Brassica oleracea
source: PMRD, original name: bol-miR158

Taxonomy by NCBI:
Brassica oleracea Brassica Brassicaceae Brassicales malvids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TCCCAAATGTAGACAAAGCA

miRNA*
 CTTTGTCTATATTCTTGGAAA

mismatches: 3
bulges: 1
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pre-miRNA
 ACGTCTTCTCGGTATTTCTTTGTCTATATTCTTGGAAAAAGCGATGAGGTCTCGTTGCACTTTCCCAAATGTAGACAAAGCAAAACCGTGATGACGT

dot-bracket secondary structure
(((((.((.((((.((.(((((((((((((...(((((..(((((((....)))))))..)))))..))))))))))))).)).)))).)).)))))


SIMILARITIES
miRBase aly-MIR158a: 0.0000000000003

PMRD bra-miR158: 0.00000000000008

microPC no hits		UniProt no hits

RFAM MIR158: 0.0000000004

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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