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Species belonging to selected taxon:

Gossypium arboreum, Gossypium hirsutum, Gossypium raimondii, Theobroma cacao



ABOUT THIS RECORD

ID: MNEST048482
species: Gossypium arboreum
source: PMRD, original name: gar-miR158

Taxonomy by NCBI:
Gossypium arboreum Gossypium Malvoideae Malvaceae Malvales malvids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 GCCCAAATGTAGACAAAGGC

miRNA*
 CCTAAATCCTCTCTCTCGCATCGCAGAGTAAAACCACACAGCAAAAATAAAAGTCACAAACGGG

mismatches: 6
bulges: 49
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pre-miRNA
 GCCCAAATGTAGACAAAGGCCTGAGCCCTAAATCCTCTCTCTCGCATCGCAGAGTAAAACCACACAGCAAAAATAAAAGTCACAAACGGGCAAACAGCTC
CATCTCTCTGCCGCTTCCTTTCACAGATCAACAACTGCTGCCTCTCTTTCTCACATTGATGC

dot-bracket secondary structure
((((...(((.(((...(((....)))...........((((.((...))))))........................))))))...))))...((((..
......((((.............)))).........))))......................


SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits		UniProt no hits

RFAM no hits

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
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