ABOUT THIS RECORDspecies: Gossypium hirsutum
source: PMRD, original name: ghr-miR169
Taxonomy by NCBI:
Gossypium hirsutum Gossypium Malvoideae Malvaceae Malvales malvids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA ACGCCAAGGATGTCTTGCGTC miRNA* CGACAACGTCTTCCACCGTCT mismatches: 3 bulges: 4 |
pre-miRNA
GACGACAACGTCTTCCACCGTCTCGTCGACGCCAAGGATGTCTTGCGTC
dot-bracket secondary structure
((((.(((((((((....((((.....))))...)))))))..))))))
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
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GACGACAACGTCTTCCACCGTCTCGTCGACGCCAAGGATGTCTTGCGTC
dot-bracket secondary structure
((((.(((((((((....((((.....))))...)))))))..))))))
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM no hits |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
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