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Species belonging to selected taxon:

Gossypium arboreum, Gossypium hirsutum, Gossypium raimondii, Theobroma cacao



ABOUT THIS RECORD

ID: MNEST048521
species: Gossypium hirsutum
miRNA family: MIR414
source: PMRD, original name: ghr-miR414e

Taxonomy by NCBI:
Gossypium hirsutum Gossypium Malvoideae Malvaceae Malvales malvids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TCATCTTCATCATCATCCTCC

miRNA*
 AGGAGAAGAGGAAAATGG

mismatches: 4
bulges: 1
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pre-miRNA
 TCATCTTCATCATCATCCTCCGCTTCATCGTCGTCGTCGGCTTCTTCTTCGTCCAACGGCAGCGACGGCGGAGATAGCAGCAGTGCCAGTGGAAGCGCTA
GCAGCGGAGGAGAAGAGGAAAATGG

dot-bracket secondary structure
.(((.(((.((.((.((((((((.((..(((((((((..(((...............))).)))))))))..)).....(((((((........))))).
)).)))))))))).)).))).))).


SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits		UniProt no hits

RFAM no hits

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
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