miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Gossypium arboreum, Gossypium hirsutum, Gossypium raimondii



ABOUT THIS RECORD

ID: MNEST048526
species: Gossypium hirsutum
source: PMRD, original name: ghr-miR482c

Taxonomy by NCBI:
Gossypium hirsutum Gossypium Malvoideae Malvaceae Malvales malvids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TCTACTCCTCCCAATCC

miRNA*
 TGGTTTTACTGAAAGCTGCCTAACTTCACAGGAGAGTCCAGGAGGATTAACCATGGAGGGATCA

mismatches: 7
bulges: 117
View larger
pre-miRNA
 TCTACTCCTCCCAATCCGCTGAGATGGAGAATGTATGCGGCCAGGTAAGATAGAAATGCCATCCGTCTGCATTCACAGAGGGGCGATGGTTTTACTGAAA
GCTGCCTAACTTCACAGGAGAGTCCAGGAGGATTAACCATGGAGGGATCACCTCTTGAAGGGAAGAAAAAGATGGTTAACATGGAGGCAACAACAGGATC
TGTGATATGGGGTGA

dot-bracket secondary structure
..((((((..(((...((((....((..(((((((.((((...((((.........))))..)))).))))))).))....)))).))).....(((...
(.(((((..(((((..((..(((((....)))))..))..(((((.....))))))))))...........(((.....)))..))))).)..)))....
........)))))).


SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits		UniProt no hits

RFAM no hits

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
download this record




Liczniki na strone;