miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Helianthus argophyllus, Helianthus ciliaris, Helianthus exilis, Helianthus paradoxus, Helianthus petiolaris, Helianthus tuberosus, Helianthus annuus



ABOUT THIS RECORD

ID: MNEST048642
species: Helianthus annuus
miRNA family: MIR157
source: PMRD, original name: han-miR157a

Taxonomy by NCBI:
Helianthus annuus Helianthus Heliantheae Heliantheae alliance Asteroideae Asteraceae Asterales campanulids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TTGACAGAAGATAGAGAGCAC

miRNA*
 GCTCTCTATGCTTCTGTCAT

mismatches: 1
bulges: 1
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pre-miRNA
 TTGACAGAAGATAGAGAGCACAGAGAAGCATGAATTGCACATAGATATTGCAATTCACTCCTTCGTGCTCTCTATGCTTCTGTCAT

dot-bracket secondary structure
.((((((((((((((((((((..((.((..(((((((((.........))))))))))).))..))))))))))).))))))))).


SIMILARITIES
miRBase aqc-MIR156b: 0.000000004

PMRD mtr-miR156e: 0.000000004

microPC miR157: 4e-43		UniProt no hits

RFAM no hits

Identical with: miR157 from microPC (MNEST045574)

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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