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Species belonging to selected taxon:

Arachis duranensis, Arachis hypogaea, Arachis ipaensis, Glycine soja, Glycyrrhiza uralensis, Lotus japonicus, Medicago sativa, Phaseolus acutifolius, Phaseolus coccineus, Pisum sativum, Trifolium pratense, Cajanus cajan, Cicer arietinum, Glycine max, Vigna unguiculata, Medicago truncatula, Phaseolus vulgaris



ABOUT THIS RECORD

ID: MNEST048711
species: Medicago truncatula
miRNA family: MIR166
source: PMRD, original name: mtr-miR165

Taxonomy by NCBI:
Medicago truncatula Medicago Trifolieae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TCGGACCAGGCTTCATTCCCC

miRNA*
 GGAATGGTGTCTGATTCGAGA

mismatches: 2
bulges: 0
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pre-miRNA
 GGGGAATGGTGTCTGATTCGAGACCATTCGTCACAAGTAAACAGTAGCCTTGAGAATGATCTCGGACCAGGCTTCATTCCCC

dot-bracket secondary structure
(((((((((.(((((.(((((((.(((((....((((...........)))).))))).))))))).))))).)))))))))


SIMILARITIES
miRBase mtr-MIR166h: 2e-41

PMRD vvi-miR166h: 0.000000001

microPC miR166: 0.00000002		UniProt no hits

RFAM mir-166: 4e-40

Identical with: mtr-MIR166h from miRBase (MNEST040675)

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
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