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Species belonging to selected taxon:

Medicago truncatula



ABOUT THIS RECORD

ID: MNEST048711
species: Medicago truncatula
miRNA family: MIR166
source: PMRD, original name: mtr-miR165

Taxonomy by NCBI:
Medicago truncatula Medicago Trifolieae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TCGGACCAGGCTTCATTCCCC

miRNA*
GGAATGGTGTCTGATTCGAGA

mismatches: 2
bulges: 0

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pre-miRNA
GGGGAATGGTGTCTGATTCGAGACCATTCGTCACAAGTAAACAGTAGCCTTGAGAATGATCTCGGACCAGGCTTCATTCCCC

dot-bracket secondary structure
(((((((((.(((((.(((((((.(((((....((((...........)))).))))).))))))).))))).)))))))))


SIMILARITIES
miRBase mtr-MIR166h: 2e-41

PMRD vvi-miR166h: 0.000000001

microPC miR166: 0.00000002
UniProt no hits

RFAM mir-166: 4e-40

Identical with: mtr-MIR166h from miRBase (MNEST040675)

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
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