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Species belonging to selected taxon:

Arachis duranensis, Arachis hypogaea, Arachis ipaensis, Glycine soja, Glycyrrhiza uralensis, Lotus japonicus, Medicago sativa, Phaseolus acutifolius, Phaseolus coccineus, Pisum sativum, Trifolium pratense, Cajanus cajan, Cicer arietinum, Glycine max, Vigna unguiculata, Medicago truncatula, Phaseolus vulgaris



ABOUT THIS RECORD

ID: MNEST048714
species: Medicago truncatula
miRNA family: MIR166
source: PMRD, original name: mtr-miR166d

Taxonomy by NCBI:
Medicago truncatula Medicago Trifolieae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TCGGACCAGGCTTCATTCCCC

miRNA*
 GGAATGTTGTCTGGCTCGAGG

mismatches: 4
bulges: 0
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pre-miRNA
 GGGGAATGTTGTCTGGCTCGAGGACTCTTTCTTCTCGATCTAATGCAAATTTGTGGTCATGGATTGTAAAGTATTCTCGGACCAGGCTTCATTCCCC

dot-bracket secondary structure
((((((((..((((((..((((((..((((.....(((((((.((((....))))....))))))).))))..))))))..))))))..))))))))


SIMILARITIES
miRBase mtr-MIR166g: 8e-48

PMRD ptc-miRf10467-akr: 0.000000000005

microPC miR166: 8e-48		UniProt no hits

RFAM mir-166: 1e-46

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record

references
[1] Bonnet E, Unpublished (2007).,



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