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Species belonging to selected taxon:

Arachis duranensis, Arachis hypogaea, Arachis ipaensis, Glycine soja, Glycyrrhiza uralensis, Lotus japonicus, Medicago sativa, Phaseolus acutifolius, Phaseolus coccineus, Pisum sativum, Trifolium pratense, Cajanus cajan, Cicer arietinum, Glycine max, Vigna unguiculata, Medicago truncatula, Phaseolus vulgaris



ABOUT THIS RECORD

ID: MNEST048758
species: Medicago truncatula
miRNA family: MIR399
source: PMRD, original name: mtr-miR399j

Taxonomy by NCBI:
Medicago truncatula Medicago Trifolieae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TGCCAAAGAAGATTTGCCCTG

miRNA*
 GGGGAAATCTCTTTTGGCAGA

mismatches: 3
bulges: 0
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pre-miRNA
 TAGGGGAAATCTCTTTTGGCAGAGAGGAGTAGCTAGAGAGCTTGAACATGCTTGCTTCTAGTTTGCCAAAGAAGATTTGCCCTG

dot-bracket secondary structure
(((((.((((((..(((((((((.(((((((((................)).)))))))..)))))))))..)))))).)))))


SIMILARITIES
miRBase mtr-MIR399k: 2e-42

PMRD mtr-miR399c: 0.00000002

microPC miR399: 0.001		UniProt no hits

RFAM mir-399: 3e-41

Identical with: mtr-MIR399k from miRBase (MNEST040741)

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
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references
[1] Bonnet E, Unpublished (2007).,



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