miRNEST 2.0, an integrative microRNA resource

miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Mus musculus, Sus scrofa, Bos taurus, Rattus norvegicus, Canis lupus familiaris, Ovis aries, Macaca fascicularis, Papio anubis, Homo sapiens, Peromyscus maniculatus bairdii, Pongo abelii, Ursus americanus, Equus caballus, Oryctolagus cuniculus, Macaca nemestrina, Cavia porcellus, Bos indicus, Bos sp., Peromyscus polionotus subgriseus, Capra hircus, Pan troglodytes verus, Macaca mulatta

ABOUT THIS RECORD

ID: MNEST004923
species: Mus musculus
miRNA family: miR-1956
source: miRNEST

Taxonomy by NCBI:
Mus musculus Mus Mus Murinae Muridae Muroidea Sciurognathi Rodentia Glires Euarchontoglires Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms

SEQUENCE & STRUCTURE

miRNA
AGTCCAGGGCTGAGTCAGCGGA

miRNA*
CCCTGGCTGGCACCTGGACG

mismatches: 2
bulges: 2

View larger

pre-miRNA
GAGTCCAGGGCTGAGTCAGCGGAGCCCCGAGTGGCTTCCCTGGCTGGCACCTGGACG

dot-bracket secondary structure
..((((((((((.((((((.((((((......)))))).))))))))).))))))).

SIMILARITIES

miRBase mmu-mir-1956: 5e-26

PMRD no hits

microPC no hits

UniProt no hits

RFAM no hits

most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
Source sequences
download this record