miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Mus musculus, Rattus norvegicus, Peromyscus maniculatus bairdii, Oryctolagus cuniculus, Cavia porcellus, Peromyscus polionotus subgriseus



ABOUT THIS RECORD

ID: MNEST004936
species: Mus musculus
miRNA family: mir-488
source: miRNEST

Taxonomy by NCBI:
Mus musculus Mus Mus Murinae Muridae Muroidea Sciurognathi Rodentia Glires Euarchontoglires Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TTGAAAGGCTATTCCTTGGTC

miRNA*
 TCAAGGGTTCCCTTCCAAGG

mismatches: 4
bulges: 1
View larger
pre-miRNA
 GTGATCTTCTGGATCAAGGGTTCCCTTCCAAGGGCTTTTTGAAAGGCTATTCCTTGGTCAGTTTTCACC

dot-bracket secondary structure
((((....(((.((((((((...((((.((((.....)))).))))....)))))))))))...)))).


SIMILARITIES
miRBase cfa-mir-488: 0.0002

PMRD no hits

microPC no hits		UniProt no hits

RFAM no hits		most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record




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