ABOUT THIS RECORDspecies: Mus musculus
miRNA family: miR-3058
source: miRNEST
Taxonomy by NCBI:
Mus musculus Mus Mus Murinae Muridae Muroidea Sciurognathi Rodentia Glires Euarchontoglires Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TCAGCCACGGCTTACCTGGAAGA miRNA* TTCCTGTCAGCCGTGGGTGCCT mismatches: 4 bulges: 1 |
pre-miRNA
GATAATTCTCCAGCGTTGGAGTCAGCCACGGCTTACCTGGAAGATTGAATGTCTACTTCGGCTTTCTTCCTGTCAGCCGTGGGTGCCTCTTGCTACTGGA
AGAGCT
dot-bracket secondary structure
.....((.(((((.((.((((.((.((((((((.((..((((((......(((......)))..)))))).)).)))))))).)).)))).))..)))))
.))...
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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GATAATTCTCCAGCGTTGGAGTCAGCCACGGCTTACCTGGAAGATTGAATGTCTACTTCGGCTTTCTTCCTGTCAGCCGTGGGTGCCTCTTGCTACTGGA
AGAGCT
dot-bracket secondary structure
.....((.(((((.((.((((.((.((((((((.((..((((((......(((......)))..)))))).)).)))))))).)).)))).))..)))))
.))...
SIMILARITIES| miRBase mmu-mir-3058: 2e-42 PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
